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Sample Size
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8
votes
17
replies
15k
views
WGCNA for RNA-Seq Sample Set, Outliers, and Spearman correlation
WGCNA
Sample Size
Outliers
updated 8.7 years ago by
mh.manoj
• 0 • written 9.3 years ago by
brohawndg
▴ 150
0
votes
9
replies
4.8k
views
DESeq2 unequal sample sizes
deseq2
deseq
sample size
6.6 years ago
MrHodor
• 0
0
votes
5
replies
2.2k
views
getting sample size for RNAseq experiment
rnaseqpower
sspa
sample size
sequencing
complex-design
updated 8.3 years ago by
m.van_iterson
▴ 20 • written 8.3 years ago by
roser.navarro
• 0
4
votes
5
replies
2.1k
views
sample size determination in microarrays studies with limma analysis
limma
sample size
microarrays
statistical power
6.1 years ago
eleonoregravier
▴ 70
4
votes
1
reply
1.8k
views
Very low EdgeR Pvalues with very small sample size
edger
pvalue
sample size
updated 7.9 years ago by
Aaron Lun
★ 28k • written 7.9 years ago by
Venu Pullabhatla
▴ 40
0
votes
0
replies
1.6k
views
ATAC-seq: Sample size when pooling sample reads to call peaks
atac-seq
sample size
Peak
Normalize
6.3 years ago
jaime.alvarez.benayas
• 0
3
votes
3
replies
1.6k
views
csaw: how does unequal sample size affect filtering filterWindows step
csaw
differential binding analysis
sample size
independent filtering
statistical power
updated 6.7 years ago by
Aaron Lun
★ 28k • written 6.7 years ago by
zhangly811
• 0
3
votes
6
replies
1.4k
views
nbinomLRT function all cores usage
deseq2
nbinomLRT
sample size
biocparallel
updated 5.6 years ago by
davide risso
▴ 950 • written 5.6 years ago by
mcalgaro93
• 0
0
votes
4
replies
898
views
DESeq2: Small treatment group, large control group
deseq2
sample size
updated 5.5 years ago by
Michael Love
42k • written 5.5 years ago by
kel.chee86
• 0
9 results • Page
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Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai
by
atan
• 0
I tried reading in the .csv version of the SAF with header = F and I'm still getting an error. I'm running: ``` counts <- featureCounts( …
Comment: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
by
jovel_juan
▴ 30
enrichPlot requirements are rather low. All what it needs is to provide few columns named specifically. I student of mine wrote the first v…
Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai
by
ATpoint
★ 4.2k
SAF files must not have a header.
Comment: Running ENmix with mouse methylation manifest: readidat error - Error in readman
by
xuz
• 0
Could you try the latest version (1.40.1) to see how it works, I am not able to replicate the error message on my computer here.
Comment: Not able to install any Bioconductor 3.18 package [unable to access index]
by
merv
▴ 120
Thanks! I can confirm it is working now - had been broken since sometime yesterday.
Votes
Answer: Documenting resources in an `ExperimentHub` package?
Answer: Not able to install any Bioconductor 3.18 package [unable to access index]
Seurat/DESeq2 - single cell RNA-seq differential expression
Seurat to SingleCellExperiment Converting error in MAC
Error when converting Seurat to SingleCellExperiment
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